Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910974.1_cds_XP_016461028.1_54391
CDS Infomation

[gene=LOC107784411] [db_xref=GeneID:107784411] [protein=TBC1 domain family member 17-like] [protein_id=XP_016461028.1] [location=complement(join(55186..55206,55501..55584,55953..56204,56372..56469,57050..57155,59274..59362,59929..60051,60279..60356,60491..60660,61240..61343,61566..61661,63392..63484))] [gbkey=CDS]
Sequence

ATGTGGAGGAATCTTGGAGCTTCTGCTGATTCATTCTATCAAGTTCGTCCTGAGTGTACT
GATGATGTTCCAGAAACCAAGTTTAGAATCAAGGTCGGGAAAACCCTTAGTGCAAGAAGA
TGGCATGCTGCATTTACCCCAGAAGGTTATCTTGACGTAGGCAATGTACTTAGTCGAATT
TGTCATGGGGGAATTCATCCATCAATTAGAGGTGAAGTTTGGGAGTTTTTACTGGGTTGT
TATGATCCAAGGAGCACATTTGAAGAACGAGAGCAGTTACGACAACATCGGAGGGTACAG
TATGCTGCATTGAAAGAAGAATGCCGCACAATGTTTCCCTTGATTGGAAGTGGTCGGTTT
ATTTCTGCACCTGTTATCACTGAAGACGGTGATCCTGTTCTAGATCCTATAGTTCTTCAA
GAGTTAAATGCAGCAGAAGTATCAACTTCAGTTGGTCAAATTGGTGCTTCTGGTGGTTTT
GAAATGGTAAAGGAGCACGATAAAAGTGTAATCCAGTGGAAACTCTCATTACACCAGATA
GGGTTGGATGTGATTCGCACCGACAGGACCCTTGTATTTTATGAGAAGCAAGAGAATTTA
TCAAAGCTCTGGGATATTCTGGCTGTTTATGCTTGGTTTGACAAAGATGTCAGTTATTGT
CAAGGAATGAGTGATCTTTGCTCTCCCATGATTATTCTACTTGATGATGAAGCTGATGCA
TTTTGGTGCTTCGCGCGTATGATGAGGAGACTGAGAAGTAATTTCAGATGTACTGGGAAT
TCTGTCGGAGTGGAGGCGCAGCTGAGTAATCTAGCATCAATAACTCAAGTTGTTGATCCC
AAACTTCACCAGCACTTGGAGACATTAGGCGGAGGTAATTACGTGTTTGCTTTTCGAATG
CTCATGGTTTTGTTCCGTCGAGAATTTTCTTTCGCTGATTCGTTGTATCTTTGGGAGATG
ATGTGGGCCCTGGAATATGATCCCGATTTGTTTCTTATGTATGAAGACCCTGACTTGACT
GCTGAAAAATCTGAACGACCAAAAGTAAAGTCAATACGACAGTGTGGGAAATATGAGAGA
GAGAACATGAGAAATGGTGGTAAAGGTGCAGAAGCTCCCCTCCCGATTTCTGTGTTCCTA
GTGGCTAGTGTGCTGAAGGACAAGAGCGCGAAGTTATCGGAAGCTAGAGGACTAGACGAT
GTTGTTAAGATCCTGAATAACATTACTGGAAACTTGGACGCGAAAAAGGCATGCAGTAGT
GCAATGAAACTTCACAAGAAGTATCTTAAGAAGGCAGCCAACACCAATAGGTAG

Peptide Sequence

PEP ID

XP_016461028.1
PEP Infomation

PREDICTED: TBC1 domain family member 17-like [Nicotiana tabacum]
Sequence

MWRNLGASADSFYQVRPECTDDVPETKFRIKVGKTLSARRWHAAFTPEGYLDVGNVLSRI
CHGGIHPSIRGEVWEFLLGCYDPRSTFEEREQLRQHRRVQYAALKEECRTMFPLIGSGRF
ISAPVITEDGDPVLDPIVLQELNAAEVSTSVGQIGASGGFEMVKEHDKSVIQWKLSLHQI
GLDVIRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVSYCQGMSDLCSPMIILLDDEADA
FWCFARMMRRLRSNFRCTGNSVGVEAQLSNLASITQVVDPKLHQHLETLGGGNYVFAFRM
LMVLFRREFSFADSLYLWEMMWALEYDPDLFLMYEDPDLTAEKSERPKVKSIRQCGKYER
ENMRNGGKGAEAPLPISVFLVASVLKDKSAKLSEARGLDDVVKILNNITGNLDAKKACSS
AMKLHKKYLKKAANTNR

Transcript Sequence

Gene sequence data has not been registered.